Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLMIHSVANGLNHFCTWVMRLAYLNVLWILFSLAGLVVFGLMPATAAMFTVAREWAKGNTDAPVFSVFFRTFKKEWRASQILGLIVVTAALFLFADMRIAAQMDQPVLVNVFVSISLIFAFVVLYVFPVFSHFDVKIREVLSISFFIAFSRPAVTLLMAAGAVGVLCLVLFHVTFLLFFSGSLLSLILTKLSFKAFRSMDQRQEKEKAA
2I2J Chain:A ((4-18))----------------------------------------------------------------LSTFFRLFNRSFTQA----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2I2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 6 -175 -29.17 -11.67
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : -29.17
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_2I2J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I2J-query.scw
PDB file : Tito_Scwrl_2I2J.pdb: