Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFTAKVTARGGRAGHITSDDGVLDFDIVMPN-AKKEGQTGTNPEQLFAAGYAACFGGALEHVAKEQNIEI--DSEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPYSKATRGNVDVKLELK
4NOZ Chain:A ((15-148))--LYRAHAKATGGRDGRATVPESGLDLKLTTPRELGGAGGAGANPEQLFAAGYSACFIGAMKFVAARDKIAIPADAAIEGSVGI--GAIPNGFGIEVELKISLPGLDRDIAQTLIDRAHVVCPYSNATRGNIDVTLTL-


General information:
TITO was launched using:
RESULT:

Template: 4NOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 488 -73124 -149.84 -558.20
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -149.84
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_4NOZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NOZ-query.scw
PDB file : Tito_Scwrl_4NOZ.pdb: