Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMKLPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVNTFNPEKKIKLATYAS--------RCIEN------------EILMYLRRNNK-----IRSEVSFD---EPLNIDWDGNE-----------LLLSDVLGTDDDIITKD----------IEANVDKKL---LKKALEQLNEREKQIMELRFGLVGEEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV
4XLQ Chain:F ((105-333))-------------------------------------------------------EAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPIGDEKDSFYGDFIPDENLPSPVEAAAQSLLSEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLK-------


General information:
TITO was launched using:
RESULT:

Template: 4XLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 393 -54190 -137.89 -306.16
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain F : 0.70

3D Compatibility (PKB) : -137.89
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_4XLQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XLQ-query.scw
PDB file : Tito_Scwrl_4XLQ.pdb: