Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEVKLPGLDLKNPIIPASGCFGFGKEFSRFYDLSCLGAIMIKATTKEPRFGNPTPRVAE--TGAGMLNAIGLQNPGLDSVLHHELPWLEQFDT-------PIIANVAGSQV-----DDYVEVAEHISKAPNVHALELNISCPNVKTGGIAFGTNPEMAADLTKAVKE------VSDVPVYVKLSPNVA--NITEIALAIEEAGADGLTMINTLIGMRLDLKTGKPILANKTGGLSGPAVKPVA---IRMVYEVSQMVNIPIIGMGGVQTAEDALEFLLAGASAVAVGTA-NFVNPFACPEIIEQLPSVLLQYGYQSIEECIGRSWNHEKQPAHHRA
4OQV Chain:A ((46-363))MLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMG-FGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGL-SVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVL--GPLADYLVVNVSSP----------GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGA---LRSETGGLSGKPLRDLSTQTIREMYALTQG-RVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR----------


General information:
TITO was launched using:
RESULT:

Template: 4OQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1662 -167563 -100.82 -592.10
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -100.82
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_4OQV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OQV-query.scw
PDB file : Tito_Scwrl_4OQV.pdb: