Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVQII-FDSKTGNVQRFVNKTGFQQIR-KVDEMDH--VDTPFVLVTYTTN----FGQVPASTQSFL--EKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK
3N39 Chain:C ((23-139))--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 3N39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 463 -63141 -136.37 -590.10
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.73

3D Compatibility (PKB) : -136.37
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_3N39.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N39-query.scw
PDB file : Tito_Scwrl_3N39.pdb: