Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIGYIEERFQNLELIPSIYNQWGTGIHFCLGENIYQLKANEELN--LKMFRIVYEQTSIIFNELFEQNDDIFLVTNMYKHKKKEKCIRKLKVYQPFLKCKNHLNQIMVKTYPYPFEINKAEEYEMQQFSLLCKPRDLRVTELLKAASNEDFPQKPKFGGYSIDYPDVFFVNITKDIIFFIYDDRGCEVIAHDFKRIRPLYEKYHDWVEEYKCM
3B4X Chain:A ((304-340))-----------------PNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRV-----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 22 -3046 -138.43 -87.01
target 2D structure prediction score : 0.20
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -138.43
2D Compatibility (Sec. Struct. Predict.) : 0.20
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.163

(partial model without unconserved sides chains):
PDB file : Tito_3B4X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B4X-query.scw
PDB file : Tito_Scwrl_3B4X.pdb: