Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEDLLTNPLIIAAIIGIISAIFGKKSKEEKQNSQKRKKPQHVQSASPQKKQSKEDAPAPIPNRMEQARREAEERRRETARNLKGLERDLAAAKQKTVYTKQKMLQVNKDTVVQGIVLGEVFGPPRAKKPHRTMRPARKN
2LS4 Chain:A ((4-18))-------YLCIAVAAGAGTGYF---------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2LS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 5 -1341 -268.10 -89.37
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -268.10
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_2LS4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LS4-query.scw
PDB file : Tito_Scwrl_2LS4.pdb: