Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLSVFDLE--ED---PLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVSALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNA--KETTDFTVNLAK-----TEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDREEITLDDVKMLVARS--LEQNIFELINKIVNRKRTESLQIFYDLLK--QNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY
2GNO Chain:A ((7-299))--ETLKRIIEKSE-GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKYVIVHDCERMTQ--------QAANAFLKALEEPPEYAVIVLNTR--RW---HYLLPTIKSRVFRVVVNVPKEFRDLVKEKIGDLWEELPLLERDFKTALEAYKLGAEKLSGLME-SLKVLETE------------KLLKKVLSKGLEGYLACRELLERFSKVESKEFFALFDQVTNTITGKDAFLLIQRLTRII---LHENTWES--VEDQKSVSFL--------DSILRVKIANLNNKLTLMNILAIHRERKR----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1152 10225 8.88 36.91
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 8.88
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_2GNO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GNO-query.scw
PDB file : Tito_Scwrl_2GNO.pdb: