Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK
1JF8 Chain:A ((2-128))-DKKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKE------WSEFQRVRDEIKLAIEKF-----


General information:
TITO was launched using:
RESULT:

Template: 1JF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 650 -63510 -97.71 -500.08
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -97.71
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.668

(partial model without unconserved sides chains):
PDB file : Tito_1JF8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JF8-query.scw
PDB file : Tito_Scwrl_1JF8.pdb: