Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSI--QAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDG-DYYSVMGLPISKTMRALRHFDIRA
4LU1 Chain:A ((25-206))----LILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSAQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLR------


General information:
TITO was launched using:
RESULT:

Template: 4LU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 923 -47295 -51.24 -264.22
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -51.24
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.777

(partial model without unconserved sides chains):
PDB file : Tito_4LU1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LU1-query.scw
PDB file : Tito_Scwrl_4LU1.pdb: