Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKDHVGAVYELLNEAAIMIKNELQISYIEALAEAGEMYFLEKTDQLKLPADQKTKQLQALLEKAEFGTYEHEWVRKAFQLAVLKGMKDISHPNRQMTPDTIGLFISYLVNKFMADKKELTILDPALGTGNLLFTVLNQLSEKTANSFGIEIDDVLLKIAYAQANLLKKELELFHQDSLEPLFIDPVDTVICDLPVGYYPNDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMIPNHLFESSQSGKLKQFFKDKVHINALLQLPKSIFKDEAHAKSILVLQKQGENTKAPGQILLANLPSFSNQKAMLDMMAQFDEWFKKEK
3GU3 Chain:A ((9-95))--------------------------------------------------------------------------------------------------------YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYT-GIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAIC-----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 357 -39844 -111.61 -457.97
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -111.61
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_3GU3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GU3-query.scw
PDB file : Tito_Scwrl_3GU3.pdb: