Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILVIDDHPAVMEGTKTILETDSNLSV--DCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKIIVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECLILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL
4LDZ Chain:A ((5-198))MISIFIAEDQQMLLGALGSLLNLEDDMEVVGKGTTGQDAVDFVKKR---QPDVCIMDIEMPGKT-GLEAAEEL--KDTGCKIIILTTFARPGYFQRAIKAGVKGYLLKDSPSEELANAIRSVMNGKRI----YAPELMEDLYSEANP--------LTDREKEVLELVADGKNTKEIAQELSIKSGTVRNYISMILEKLEVKNRIEAITRSKE----


General information:
TITO was launched using:
RESULT:

Template: 4LDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 875 22415 25.62 116.74
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 25.62
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_4LDZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDZ-query.scw
PDB file : Tito_Scwrl_4LDZ.pdb: