Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVLKRIRDMFVASVHEGLDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLAFDAGEEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQALIARANAAKAKEHMNTTFDKIDSESAYREFLRIENRIEEMEIRANYSKSAEAGTELTRKEFADDVEAEIEKMRTLSLQKSDQTKAANE
4D3V Chain:A ((301-325))--------------------------------------------SIVDHHTAASQF-KRFEEQAEEAGRK-----------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 13 -1419 -109.15 -56.76
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -109.15
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.668

(partial model without unconserved sides chains):
PDB file : Tito_4D3V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D3V-query.scw
PDB file : Tito_Scwrl_4D3V.pdb: