Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSELFSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLVQDQLTKNAVVLKRIQHLDEAYNKVKRGESK
5AN5 Chain:B ((5-21))-----------------------------------------------TNFDILKRLSNLEKHVF--------


General information:
TITO was launched using:
RESULT:

Template: 5AN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2 -414 -206.75 -24.32
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -206.75
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.784

(partial model without unconserved sides chains):
PDB file : Tito_5AN5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AN5-query.scw
PDB file : Tito_Scwrl_5AN5.pdb: