Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGVIDYGMGNLYSVSKALERVGVPYFVSEKPEE--LKEADAFILPGVGSFGDAMDNLGYTKLDQLIHDMVSEGRLLLGICLGMQLLFEESEENGTASGLGLLKGKAVRLKAEDEKGNKLKVPHMGWNRLSFHNESPLLTKTEQGYAYFVHSYYI-------DGMEENAL-LASADYGV-RVPAVVGKRNVFGAQFHPEKSSTVGMSILTQFTKMAAEQKVKK
1OX4 Chain:A ((6-235))VVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGICVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEK-----PVPEIGWNSC-IPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGKAGLNVIENFLKQQS------


General information:
TITO was launched using:
RESULT:

Template: 1OX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1049 -25805 -24.60 -129.03
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -24.60
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_1OX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OX4-query.scw
PDB file : Tito_Scwrl_1OX4.pdb: