Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPYGY-KNRKTDRTSFEKAWKQMGSQAVVIQK
3K8U Chain:A ((5-132))--------------------------------------------------------------HYKLVPQID----TRDCGPAVLASVAKHYGSNYSIAYLRELSKTNK------------------------QGTTALGIVEAAKKLGF-ETRSIK-ADMTLF-DYNDLTYPFIVHVIKG-------------------KRLQHYYVVYGSQNNQLIIGDPDPSVKVTRMSKERFQSEWT-----------


General information:
TITO was launched using:
RESULT:

Template: 3K8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 605 -46932 -77.57 -369.54
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -77.57
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_3K8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K8U-query.scw
PDB file : Tito_Scwrl_3K8U.pdb: