Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQYDWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTCLNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTPIVTTEY
1PP5 Chain:A ((10-17))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVGIGTPI-----


General information:
TITO was launched using:
RESULT:

Template: 1PP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4 -509 -127.13 -63.56
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -127.13
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 1.069

(partial model without unconserved sides chains):
PDB file : Tito_1PP5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PP5-query.scw
PDB file : Tito_Scwrl_1PP5.pdb: