Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
2VEC Chain:A ((227-250))
---------------CGDGAFIRDEANITLVADSPLRAL------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VEC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2771 for 59 contacts (-47.0/contact) +
2D Compatibility (PS) -2732 + (NN) -1640 + (LL) 8820
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -473.0 ( -8.02 by residue)
QMean score : -0.077
(partial model without unconserved sides chains):
PDB file :
Tito_2VEC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VEC-query.scw
PDB file :
Tito_Scwrl_2VEC.pdb
: