Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGP------GLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDY |
1JDR Chain:A ((110-192)) | ---------------------------------------------------------------------------------------------------------LGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLP-DADKDADYVR-------------TFFQRLNMNDREVVALMGAHTLGKTHLKNS-GYEGPWT---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7668 for 337 contacts (-22.8/contact) +
2D Compatibility (PS) -8427 + (NN) -3858 + (LL) 14444
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -10609.0 ( -31.48 by residue)
QMean score : -0.059
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