Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVWGA---TGPNQ----------FDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPG---HVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
| 3PBI Chain:A ((119-226)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSQMGVPYSWGGGSLQGPSKGVDSGANTVGFDCSGLVRYAFAGVGVLIPRFSGDQYNAGRHVPPAEAKRGDLIFYGPGGGQHVTLYLGNGQMLEASGSAGKVTVSPV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43748 for 622 contacts (-70.3/contact) +
2D Compatibility (PS) -10162 + (NN) -6089 + (LL) 13824
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -55475.0 ( -89.19 by residue)
QMean score : 0.513
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