Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
3RQG Chain:A ((129-178))
------------------------FLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSD-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205 for 223 contacts (-0.9/contact) +
2D Compatibility (PS) -5251 + (NN) 190 + (LL) 4468
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -4648.0 ( -20.84 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3RQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RQG-query.scw
PDB file :
Tito_Scwrl_3RQG.pdb
: