Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRRMQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFFNRTPAEARMRILEGRRRQVEERREGLREAVARASSSFDRYTRQLHQLGLESSEREVKWLNELIAAERAAPNPAEQT
1XMA Chain:A ((42-118))
-VDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEET--KRRT--YYRITPEGIKYY----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45720 for 489 contacts (-93.5/contact) +
2D Compatibility (PS) -7932 + (NN) -2989 + (LL) 7236
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -56455.0 ( -115.45 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1XMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMA-query.scw
PDB file :
Tito_Scwrl_1XMA.pdb
: