Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1X3F Chain:A ((3-120))
--GDTTITVVGNLTADPELRFTPSGAAVANFTVASTPR-----------GEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X3F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56434 for 681 contacts (-82.9/contact) +
2D Compatibility (PS) -11690 + (NN) -4347 + (LL) -476
1D Compatibility (HY) -12000 + (ID) 5150
Total energy: -90097.0 ( -132.30 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_1X3F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3F-query.scw
PDB file :
Tito_Scwrl_1X3F.pdb
: