Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT |
| 3SM3 Chain:A ((32-50)) | ------------------------------------------------------------------------------------------------------------------------------------DEILDIGCGSGKISLELAS---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78 for 75 contacts (-1.0/contact) +
2D Compatibility (PS) -2158 + (NN) -562 + (LL) 8044
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 3796.0 ( 50.61 by residue)
QMean score : 0.067
|
|
|