Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYR-FQRGPVLVVVEDGRISAVDFAGSA-CPD-MNLVDLGESTLLPGLVDAHAHLC--WDPDGRP---EDLAGDPHAVLVGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSG---GHCWFLGGVA------DSVEELVDA-----------------VQERAARGADWIKVMATGGFVTTASD-------PWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYPEMPENLVAVVQDGW----------RNIRRLIDAGARVALSTDAG---------VAPGRRHD---VLPDDLVY----LSRHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPA----GLCDVKAVWRSGTQVPLQASAVGYNTPS |
| 4WHB Chain:E ((4-445)) | ---------------IAITNVTLIDGLGGLPRPATTVIVEGDRFATVGPSDSTPVPEGATVVDGNRRWMVPGYVNGNVHLLDAWMFMAGPGTIEYLA-RWEGRYVEVIEEAAQLALRNGVTTVFDTHNAIEPVLAARDRINAGISQGARIFAAGTIVGMGGPFSADFHFAGRTAATRTFVDRIDSMFEAGVGHQLSLLPRKEVRARVRDYLSRGVDMLKIAVSDHIVFTLVDRSVGFDRSYQ-TFSRPVLEVMVEEARAAGVPVLTHSVSVEALDTSVELGADVLIHANY-TLGQEIPNY-LIDKIVASDSWAGLQT--VHDQHRQGLEDV--GSWAAALAGEPYATNERNLISANAKILLNTDAGCPSKDHLADLSPVEREDRPWTIGNDHFHWTQSMVEKGMSPLEAISAATINVARAYGKADQIGSVETGKLADFVL----LDQDPVDDIRNLRSITEVFQAGAAV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192527 for 3201 contacts (-60.1/contact) +
2D Compatibility (PS) -41419 + (NN) -26413 + (LL) 1300
1D Compatibility (HY) -20800 + (ID) 5300
Total energy: -285159.0 ( -89.08 by residue)
QMean score : 0.413
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