Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDSIFNLLTEEQLRGRNTLKWNYF--GPDVVPLWLAEMDFPTAPAVLDGVRACVDNEEFGYPPLGEDSLPRATADWCRQRYGWCPRPDWVRVVPDVLKGMEVVVEFLTRPESPVALPVPAYMPFFDVLHVTGRQRVEVPMVQQDSGRYLLDLDALQAAFVRGAGSV-IICNPNNPLGTAFTEAELRAIVDIAARHGARVIADEIWAPV-VYGSRHVAAASVSEAAAEVVVTLVSASKGWNLPGLMCAQVILSN---RRDAHDWDRINMLHRMGASTVGIRANIAAYHHGESWLDELLPYLRANRDHLARALPELAPGVEVNAPDGTYLSWVDFRALALPS-EPAEYLLSKAKVALSPGIPFGAAVGSGFARLNFATTRAILDRAIEAIAAALRDIID |
| 3L8A Chain:A ((51-419)) | ------------------TYKWKTSENNPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFNDD-LYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSL-QIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEV--PTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKEL-EAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKE-GKYFARLNVATPKNTVQEALSRIISVF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270094 for 3215 contacts (-84.0/contact) +
2D Compatibility (PS) -39467 + (NN) -21424 + (LL) 1880
1D Compatibility (HY) -23600 + (ID) 5100
Total energy: -357805.0 ( -111.29 by residue)
QMean score : 0.499
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