Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSCNGCEVEISGAFGPVYDAERFGARLVASPQHADALLVTGVVTHNMAGPLRKTLEATPRPRVVIACGDCALNRGVFA------DAYGVVGAVGEVVPVDVEIAGCPPTPAAIMAALRSVTGK
1UBK Chain:S ((89-161))
-----------------------------------------------------------------------------------VANHTMLDICSRIL---PKAQAVIAYGTCATFGGVQAAKPNPTGAKGVNDALKHLGVKAINIAGCPPNPYNLVGTI------
General information:
TITO was launched using:
RESULT:
Template:
1UBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43100 for 427 contacts (-100.9/contact) +
2D Compatibility (PS) -6816 + (NN) -68 + (LL) 5548
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -49686.0 ( -116.36 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_1UBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UBK-query.scw
PDB file :
Tito_Scwrl_1UBK.pdb
: