Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKV-PAKLVVGSKFSTKMKLFGLPYRITSRVTALKPNELVEWSHPL-GHRWRWEFESLSPTLTRVTETFDYHAAGAIKNGLKFYE-----MT-GFAKSNAAGIEATLAKLSDQYARGRA |
| 2M47 Chain:A ((4-156)) | --------------------------------------------------------------------------SLTFEDSINIAAPINQVYALVSDITRTGEWSPV--CEKCWWDEDEGPVVGAHFTGRNVTPERTWETRSEVIVAEPNRCFGWSVTDGNVKWIYSMEPLE-EGTVLTESWEFTPKGQR-FFHDKFGDKSIEEIEKRRLAAITGIPETLVAIQRILEVEL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2M47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28895 for 946 contacts (-30.5/contact) +
2D Compatibility (PS) -15629 + (NN) -5877 + (LL) 3856
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -54045.0 ( -57.13 by residue)
QMean score : 0.311
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