Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKNQNRIRNRWELIT---CGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLERAAMLT |
4LK9 Chain:A ((29-88)) | --KEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALR-----WQCIECKTCSSCRDQGKNA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6858 for 285 contacts (-24.1/contact) +
2D Compatibility (PS) -6517 + (NN) -6720 + (LL) 19376
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -4119.0 ( -14.45 by residue)
QMean score : 0.085
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