Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAG--VLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
3P03 Chain:A ((221-309)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACSLGLGALQIGAGL--SAAN----DWTIVGIVSVLTLAFIFSAISGVGKGIQYLSNANMVLAALLAIFVF------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33701 for 296 contacts (-113.9/contact) +
2D Compatibility (PS) -6378 + (NN) -307 + (LL) 11824
1D Compatibility (HY) -8000 + (ID) 1200
Total energy: -37762.0 ( -127.57 by residue)
QMean score : -0.055
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