Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDADLDRLDEVSFEVLSTPERLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP
3SLL Chain:A ((106-159))
--------------------------------------------------------------------------LRSMELLDEVILTLRRMHQPVIAAINGAA----IGGGLCLALACDVRVASQDAYFRAA----
General information:
TITO was launched using:
RESULT:
Template:
3SLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3808 for 293 contacts (-13.0/contact) +
2D Compatibility (PS) -5628 + (NN) -1429 + (LL) 6288
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -11127.0 ( -37.98 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_3SLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SLL-query.scw
PDB file :
Tito_Scwrl_3SLL.pdb
: