Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA
1IQ6 Chain:A ((32-132))
---------------------------------------DFNPLHLDPAFAATTAFERPIVHGMLLASLFSGLLGQQLPGKG---SIYLG-QSLSFKLPVFVGDEVTAE---VEVTALREDKPIATLTTRIFTQGGAL-AVTGEAVVK---
General information:
TITO was launched using:
RESULT:
Template:
1IQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41975 for 674 contacts (-62.3/contact) +
2D Compatibility (PS) -11227 + (NN) -5146 + (LL) 4124
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -63174.0 ( -93.73 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1IQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQ6-query.scw
PDB file :
Tito_Scwrl_1IQ6.pdb
: