Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRSIDDLPLT-RF---HGDVFDTATVAEAMAGC--DDVYYCVVDTRA--WLRDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGR------RRGHVATEE--------DRVDTRKV-------------TPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGR-LPFTMRGIRL-EAVGVDDAARALILAAERGRNGERYLI--SERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPRPVEES-IREAARFWAAMRTVGKDPAAS |
| 1KEW Chain:A ((4-336)) | -----LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY-AGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVA-----RKY-----WSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYV--------ADRPGHDRRYA------------IDAGKISRELGWKPLETFESGIRKTVEWYLA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113627 for 2382 contacts (-47.7/contact) +
2D Compatibility (PS) -31922 + (NN) -14903 + (LL) 2776
1D Compatibility (HY) -16000 + (ID) 4250
Total energy: -177926.0 ( -74.70 by residue)
QMean score : 0.421
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