Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRD-AADAQAVVTNYHVGGILI--GSDTDLTIFDGALAEIVAGGGPLPLAVSVDEEGGRVSRLRSLIGGTGPSARELAQTRTVQQVRDLARDRGRQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVLKHFPGHGRGSGDSHNGGVT-TPPLDDLVGDDLVPYRTLV-TQAPVGVMVGHLQVPGLTGSEPASLSKAAV-NLLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALWVTTKEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
| 5BZA Chain:A ((5-314)) | ----------------------------------------------------------------LGKLFFCGFDDFNEEAREVIQKYRPAGVLIYPGVLSKEYLFLDFMNFLSRNGR---FIVSSDHEGGQLEVLKYVPSFPGNLAAGKVDPVFTGRYCEMA---GRIMNTLGFNMVFAPVLDLLS--------LRSFGSDPEVVASHGMEACMGYFKGGVIPCIKHFPGHGKTADDSHYLLPTVNASFEELWREDLLPFRRIFQSRVKTAVMTAHVKYPAVDDL-PATLSKKLITEVLREKLN-----FKGLVLSDAME-MKAISENFSVEEAVRFFIEAGGNMILLDNFRDLPVYYESLKKLIEDGSIERGKVERSI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156270 for 2584 contacts (-60.5/contact) +
2D Compatibility (PS) -31864 + (NN) -18174 + (LL) 3244
1D Compatibility (HY) -24800 + (ID) 4750
Total energy: -232614.0 ( -90.02 by residue)
QMean score : 0.493
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