Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR |
| 5CNL Chain:A ((79-116)) | ------------------------------------------------------------------------------------------------------------------------------------------LDPTHWQAIMP-----ILVVYKNPQYEQKQNLKVVLGFTVASP---------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5CNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1554 for 136 contacts (-11.4/contact) +
2D Compatibility (PS) -4102 + (NN) -1038 + (LL) 13224
1D Compatibility (HY) 2000 + (ID) 200
Total energy: 8330.0 ( 61.25 by residue)
QMean score : 0.165
|
|
|