Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIGTRGSLLATTQAATVRDALIAG--GHSAELVTISTEGDRSMAPIASLGVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARD---GLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKV-SSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH |
| 3EQ1 Chain:A ((20-299)) | VIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIA-------------------FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVA-----VHTAMKDGQLY----LTGGVWSLDGSDSIQET--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87553 for 1946 contacts (-45.0/contact) +
2D Compatibility (PS) -27683 + (NN) -19341 + (LL) 4416
1D Compatibility (HY) -20000 + (ID) 5750
Total energy: -155911.0 ( -80.12 by residue)
QMean score : 0.469
|
|
|