Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
| 1NPP Chain:A ((130-248)) | ---------------------------------------------------------------------------------------------------LDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNIL---NQIKRGVKPS-----------------KVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46692 for 644 contacts (-72.5/contact) +
2D Compatibility (PS) -12626 + (NN) -4056 + (LL) 7912
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -70212.0 ( -109.02 by residue)
QMean score : 0.384
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