Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSARGGSLHGRVAFVTGAARAQGRSHAVRLAREGADIVALDICAPVSGSVTYPPATSEDLGETVRAVEAEGRKVLAREVDIRDDAELRRLVADGVEQFGRLDIVVANAGVLGWGRLWELTDEQWETVIGVNLTGTWRTLRATVPAMIDAGNGGSIVVVSSS-AGLKATPGNG---HYAASKHALVALTNTLAIELGEFGIRVNSIHPYSVDTPMI-EPEAMIQTFAKHPGYVH----SFPPMPLQPKGFMTPDEISDVVVWLAGDGSGALSGNQIPVDKGALKY |
| 4RGB Chain:A ((21-289)) | -----GSLDGRVVFITGAARGQGRSHAVMCAEQGANIVGVDICEDID-IVPYKLGTYEELEETARLVEKTGQEMLFRKADVRDKAVLQEVFDAGVEQFGHIDTVIANAGVVLTNPDERDASEALRLGLDIMLIGVWNTFQVAIPHMKERGQGGNLIATSSMIALLDLTDGRGGTDAYLTSKLAITGLVRSYALMLAADRIRVNGVAPTNCSTPMITENPALFKVIEENPHLVNAMSTALPDFPM-----IEPRDVSNAILFLISDAGRSFTGSVLKVDAG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136792 for 2282 contacts (-59.9/contact) +
2D Compatibility (PS) -28291 + (NN) -15289 + (LL) 560
1D Compatibility (HY) -21600 + (ID) 5250
Total energy: -206662.0 ( -90.56 by residue)
QMean score : 0.558
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