Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVPAVSPQPILAPLTPAAIFLVATIGA--DGEATVHDALSKISGLVRAIGFRDPTKHLSVVVSIGSDAWDRLFAGPRPTELHPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRILKSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAIKATTIGDEDRNFAGSCYVHVQKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVRHNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFSPTIDFL---DHPPPLPQAATPTLAAGSLSIGSLKGSPR
3VEG Chain:A ((9-316))---ARLAPQAVLTPPSAASLFLVLVAGDSDDDRATVCDVISGIDGPLKAVGFRELAGSLSCVVGVGAQFWDRVSASSKPAHLHPFVPLSGPVHSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDSRDLLGFVDGTENPTDDDAADSALIGDEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDAQPSNSHVTLNTIVDDDGVEHDILLDNMAFGSLGEAEYGTYFIGYAKDPAVTELMLRRMFLGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163714 for 2525 contacts (-64.8/contact) +
2D Compatibility (PS) -32901 + (NN) -19971 + (LL) 984
1D Compatibility (HY) -29600 + (ID) 9000
Total energy: -254202.0 ( -100.67 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_3VEG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VEG-query.scw
PDB file : Tito_Scwrl_3VEG.pdb: