Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLA-DHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAV---ALHARTAAQRYSGTADWE-------QIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 3B0U Chain:X ((8-306)) | -------------------------VAPMVDRTDRHFRFLVRQ-----VSLGVRLY-TEMTVDQAVLRGN--RERLLAFRPEEHPIALQLAGSDPKSLAEAARI--GEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKA---MGEAVRVPVTVKMRLGL-EGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADRRVFG--LPRRPSRLEVA---RRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALD------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164040 for 2347 contacts (-69.9/contact) +
2D Compatibility (PS) -30386 + (NN) -7897 + (LL) 3956
1D Compatibility (HY) -16800 + (ID) 4700
Total energy: -219867.0 ( -93.68 by residue)
QMean score : 0.422
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