Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
5BMZ Chain:A ((44-129))
-------------------------------ISLPQFTALSVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLNQCNQVVQQLEAQML--------------------------
General information:
TITO was launched using:
RESULT:
Template:
5BMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44250 for 578 contacts (-76.6/contact) +
2D Compatibility (PS) -9228 + (NN) -3535 + (LL) 4496
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -59017.0 ( -102.11 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_5BMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BMZ-query.scw
PDB file :
Tito_Scwrl_5BMZ.pdb
: