Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAWQDH-----AEVSVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCGV-------PYTDAL-------PEMPEPAIEVEP-PVCD---CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
2NYR Chain:A ((22-270))--IVIISGAGVSAESGVPTFRG-AGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTE--------RFHFQGPCGTTLPEAL--------


General information:
TITO was launched using:
RESULT:

Template: 2NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121132 for 1768 contacts (-68.5/contact) +
2D Compatibility (PS) -23692 + (NN) -14314 + (LL) 896
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -182242.0 ( -103.08 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_2NYR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NYR-query.scw
PDB file : Tito_Scwrl_2NYR.pdb: