Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDV-NLEATEVAAKRLGGDDV-ALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI
3OSU Chain:A ((5-245))
-------KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY-
General information:
TITO was launched using:
RESULT:
Template:
3OSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136340 for 2092 contacts (-65.2/contact) +
2D Compatibility (PS) -25588 + (NN) -3538 + (LL) 944
1D Compatibility (HY) -16000 + (ID) 5000
Total energy: -185522.0 ( -88.68 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3OSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OSU-query.scw
PDB file :
Tito_Scwrl_3OSU.pdb
: