Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQFSFE----QSRHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHTQDLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPLPTAVRWAMRIPGGKAVHRLLSQA----FVEATFPIAA---------------------HYFAVFPLAKHMESAG-------RRYLRQQVHDPVVREQLTPRYAVGCKRPGFHNTYLSTFNRDNVRLVT---EPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGYVGSSYFALIETQAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSC-RLANSYYFDKNGDVPLRPTTTVEAYWRSRRFDLGDYRISS |
| 4RG3 Chain:A ((19-496)) | ------AVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGN-YRRIEIRGRDGLHINDHWD-GQPTSYLGVSTANFPNWFMVLGPNGPF-TNLPPSIETQVEWISDTIGYAERNGVRAIEPTPEAEAE--------------WTETCTEIANATLFTK------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -275836 for 3587 contacts (-76.9/contact) +
2D Compatibility (PS) -46943 + (NN) -13604 + (LL) 3392
1D Compatibility (HY) -24400 + (ID) 8200
Total energy: -365591.0 ( -101.92 by residue)
QMean score : 0.437
|
|
|