Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSLDNTADEKPAIDPILLKVLDA---VPF-RLSIDDGIEAVRQRLRDLPRQPVHPELRVV-DLAIDGPAGPIGTRIYWPPTCPDQAEAP--VVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAF-SRWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG |
| 3WJ1 Chain:A ((3-289)) | -------------LDPRIKKLLESGFVVPIGKASVDE----VRKIFRQLASAAPKAEVRKVEDIKIPGSETSINARVYFP-----KAKGPYGVLVYLHGGGFVIGDVESYDPLCRAITNACNCVVVSVDYRLAPEYKFPSAVIDSFDATNWIYNNLDKFDGEMG-IAIAGDSAGGNLAAVVALLSK--GKLDLKYQILIYPAVGFDSVSRSMIEYSDGFFLTREHIEWFGSQYLRSPADLLD--FRFSPIIAQDLSGLPPALIITAEYDPLRDQGEAYANRLLQAGVPVTSVRFNNVIHGFLSFFPLIDQGKDA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214521 for 2503 contacts (-85.7/contact) +
2D Compatibility (PS) -30134 + (NN) -19525 + (LL) 1456
1D Compatibility (HY) -25600 + (ID) 5450
Total energy: -293774.0 ( -117.37 by residue)
QMean score : 0.543
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