Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKK---AVVLGRVARDGGQVKLDGQVWTAR-PLND-GDVFEPGDSVTVVQIDGATAVVFKDV |
| 4YTL Chain:A ((7-60)) | ----------------------------------------------------------------------------------IEVLNGEQRGSKGIVTRTTKDIATIKLNGFTTPLEFPISTLRKIFEPGDHVTVI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4892 for 226 contacts (21.6/contact) +
2D Compatibility (PS) -5199 + (NN) -370 + (LL) 9328
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 4551.0 ( 20.14 by residue)
QMean score : 0.268
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