Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLGDLTNFVEKPLAAVSNIVNTPNSAGRYRPFYLRNLLDAVQGRNLNDAVKGKVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGGVDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRER-HFGHIVNVSSVGVQTRAPRFGA-YIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPM-----------------------ISPTTIYDKFPTLTPDQAAGVITDAIVHRPRRASSPFGQFAAVADAVNPAVMDRV-RNRAFNMFGDSSAAKGSESQTDTSELDKRSETFVRATRGIHW |
| 4YAG Chain:A ((3-271)) | --------------------------------------------------IAGTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDE-ARQFFEERQQGRNVHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAG--IDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSMAEDNIGVTVLMPGPIKSRIHESGQNRPERFRAGSGLAETEQQLAKRVVADNW--MEPTEVGDMIVDAIVHNKLYVST-HGNWRETCEARFQALLDSMP------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159036 for 2048 contacts (-77.7/contact) +
2D Compatibility (PS) -27196 + (NN) -13959 + (LL) 4540
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -211451.0 ( -103.25 by residue)
QMean score : 0.460
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