Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
4QNJ Chain:A ((8-191))
---------ARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIP----TQRVGT---YDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRR----------
General information:
TITO was launched using:
RESULT:
Template:
4QNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126563 for 1580 contacts (-80.1/contact) +
2D Compatibility (PS) -19528 + (NN) -4949 + (LL) 1384
1D Compatibility (HY) -10400 + (ID) 4600
Total energy: -164656.0 ( -104.21 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_4QNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QNJ-query.scw
PDB file :
Tito_Scwrl_4QNJ.pdb
: