Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALPHGHSAVLAQQLSPET----LIIDCGADFRLTDAAVWERFYGS----SHAGSWPYGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAADLIEPA-VTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLSQ--LRAAYEKAYHAEPFIYLMPEGQ----LPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
| 5EIO Chain:A ((2-344)) | -------DKKTLSIVGASGYAGGEFLRLALSHPY-----LEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFIPPEK--LEPADILVLALPHG---VFAREFDRYSALAPILIDLSADFRLKDPELYRRYYGEHPRPDLLGCFVYAVPEL--YREALKGADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAAGAEASPASHHPERAGSIRVYKPTG-HRHTAEVVENLPGRPE----VHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPRFVQGTNYADIGFELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPETLGLDFPGLHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222120 for 2882 contacts (-77.1/contact) +
2D Compatibility (PS) -36036 + (NN) -15602 + (LL) 1456
1D Compatibility (HY) -26000 + (ID) 6650
Total energy: -304952.0 ( -105.81 by residue)
QMean score : 0.445
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