Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER
5C8L Chain:A ((7-129))
------KTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIPLLPNGNVVMIHQYRHAVKKVFLEFPAGKRD-HNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYLARDL-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5C8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41773 for 769 contacts (-54.3/contact) +
2D Compatibility (PS) -13432 + (NN) -5250 + (LL) 6996
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -65409.0 ( -85.06 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_5C8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5C8L-query.scw
PDB file :
Tito_Scwrl_5C8L.pdb
: